Introduction to crystallographic refinement of macromolecular atomic models

Refinement of atomic models is a necessary step in solving the macromolecular structure by X-ray diffraction methods. Nowadays, high automation and well-developed interfaces give a possibility to use the most popular refinement programs as black boxes. Nevertheless, working with complex objects requires an understanding of the internal structure and principles of operation of these programs and critical assessment of the results of refinement. In this review, we discuss the basic principles of the organization of refinement programs and the history of their improvement and development, as the studied objects became more and more complicated. The discussions are kept at the level of basic mathematic knowledge avoiding unnecessary formalism and too detailed expressions.     

电感耦合等离子体原子发射光谱法测定辛酸铑催化剂中铂钯铅铁铜铝镍

准确测定辛酸铑催化剂中杂质元素含量,是判定产品是否合格的重要指标之一。以往常采用直流电弧发射光谱法(摄谱法)进行检测,但测定周期长,且重复性较差。用电感耦合等离子体原子发射光谱法(ICP-AES)测定辛酸铑催化剂中微量杂质元素时,辛酸铑催化剂样品中含有的大量有机组分和铑基体会对测定有严重干扰。实验采用反复滴加硝酸消解样品中有机组分,再用王水溶解盐类,选用合适背景点扣除的方式消除铑基体的干扰,建立了使用ICP-AES测定辛酸铑催化剂中0.001%~0.1%(质量分数)Pt、Pd、Pb、Fe、Cu、Al、Ni等7种微量杂质元素的方法。各元素在0.10~10.00μg/mL范围内与其发射强度呈线性关系,相关系数均大于0.9999;方法检出限(μg/mL)为0.075(Pt)、0.0033(Pd)、0.015(Pb)、0.0036(Fe)、0.010(Cu)、0.001(Al)、0.012(Ni)。实验方法用于测定辛酸铑催化剂样品中Pt、Pd、Pb、Fe、Cu、Al、Ni,结果的相对标准偏差为(RSD,n=7)为1.4%~9.6%。按照实验方法测定辛酸铑催化剂中Pt、Pd、Pb、Fe、Cu、Al、Ni,并与直流电弧发射光谱法的测定结果进行比对,结果相一致。     

高分辨连续光源原子吸收光谱法测定铀铌铅多金属矿中痕量银

铀铌铅多金属矿组成成分复杂,准确有效的测定其中的痕量银,有利于银的回收利用。采用HCl-HNO₃-HF-HClO₄处理铀铌铅多金属矿样品,以HCl(1+4)-2g/L酒石酸为测定介质,以λ_Ag=328.068nm为分析谱线,建立了高分辨连续光源原子吸收光谱法(HR-CS-AAS)测定铀铌铅多金属矿样品中痕量银的新方法。对仪器参数进行了优化,确定采用迭代基线校正(IBC)背景校正方式,CCD检测器有效像素点选择5个;由银的平均吸收光谱图和吸光度-波长-时间三维吸收光谱图可知,银的CCD检测器分辨率为0.0020nm/pixel,λ_Ag=328.068nm在327.86~328.27nm范围内没有受到溶液中其他共存元素的谱线干扰。在优化的实验条件下,银的吸光度与其质量浓度在0.40~1.60μg/mL范围内运用二次方程最小二乘法拟合校准曲线,相关系数为0.9999,特征浓度为0.0148μg/mL,方法检出限为0.0013μg/mL。将HR-CS-AAS测定样品中银的参数与空心阴极灯原子吸收光谱法(HCL-AAS)相比,其检出限更低,特征浓度更低,标准溶液系列的吸光度更高。按照实验方法对铀铌铅多金属矿样品中的银进行测定,结果与电感耦合等离子体质谱法基本一致,相对标准偏差(RSD,n=9)为0.63%~3.3%。按实验方法在铀铌铅多金属矿样品中加入银标准溶液进行加标回收试验,回收率为97%~104%,满足国家地质矿产行业标准DZ/T 0130—2006的要求。     

基于数据拼接的金刚石刀具刃口三维形貌表征技术

原子力显微镜(AFM)是获取金刚石刀具刃口纳米级三维形貌的重要手段,但其存在测量范围小,难以表征参与切削区域整段刃口形貌特征的问题。采用基于迭代最近点法的刃口AFM测量数据拼接算法,获得了由多组数据拼接得到的刃口纳米级三维形貌,并进行了切削实验验证。实验结果表明,采用的数据拼接方法可较好地用于表征刀具刃口三维形貌。     

What is a crystal to the new chemical crystallographer,after that first,automated structure analysis?

This educational review postulates the importance of maintaining an adequate level of crystallographic education among structure-dependent scientists whose interests are not primarily in crystallography, at a time when automation and validation have made it possible to obtain high-quality structure analyses in many cases with a minimum of crystallographic background. The topics addressed are intended to form a second round of crystallographic education for a novice user whose first round involved hands-on experience with structure solution and an introduction to elementary concepts. The specific topics, chosen for their relevance as basic knowledge and their lack of emphasis in many formal treatments, are (1) crystallographic reference frames and the utility of the reciprocal cell in geometrical calculations; (2) the relationship between the two concepts that constitute our model of the crystal, namely the unit cell and the lattice; (3) the manner in which an atom is represented in concept and in practice; (4) the importance of interleaved symmetry elements required by the presence of additional symmetry on a lattice; (5) the harnessing of the natural properties of the crystalline state for the potential manipulation of properties of synthetic crystals; and (6) useful terminology for navigating a crystal structure.     

氢化物原子荧光光谱法测定酱油中微量铅的方法研究

建立了一种快速、高效的QuEChERS-高效液相色谱-质谱联用法（QuEChERS-HPLC-MS/MS）测定谷类杂粮制品中脱氧雪腐镰刀菌烯醇（DON）、3-乙酰脱氧雪腐镰刀菌烯醇（3-ADON）、15-乙酰脱氧雪腐镰刀菌烯醇（15-ADON）和玉米赤霉烯酮（ZON）共4种真菌毒素。样品前处理采用乙腈-水溶剂提取，经Florisil+C18+无水硫酸镁净化后检测。以0.10%甲酸-乙腈作为流动相，在质谱检测器的多反应监测模式下进行分析。结果表明，4种真菌毒素在各自的线性范围内线性关系良好，相关系数R2均大于0.999，回收率在85.1%～102.0%，相对标准偏差（RSD）为2.11%～6.22%。该方法具有前处理简单、净化效果好、灵敏度高和检测速度快的优点，适用于谷类杂粮制品中DON、3-ADON、15-ADON 和ZON的分析和定量检测。     

Atomic Modulation Triggering Improved Performance of MoO3 Nanobelts for Fiber‐Shaped Supercapacitors

Asymmetric supercapacitors (ASCs) are emerging as a new class of energy storage devices that could potentially meet the increasing power and energy demand for next‐generation portable and flexible electronics. Yet, the energy density of ASC is severely limited by the low capacitance of the anode side, which commonly uses the carbon‐based nanomaterials. Here, the demonstration of sulfur‐doped MoO_3?x nanobelts (denoted as S‐MoO_3?x) as the anode for high‐performance fiber‐shaped ASC are reported. The Mo sites in MoO₃ are intentionally modulated at the atomic level through sulfur doping, where sulfur could be introduced into the MoO₆ octahedron to intrinsically tune the covalency character of bonds around Mo sites and thus boost the charge storage kinetics of S‐MoO_3?x. Moreover, the oxygen defects are occurring along with sulfur‐doping in MoO₃, enabling efficient electron transport. As expected, the fiber‐shaped S‐MoO_3?x achieves outstanding capacitance with good rate capability and long cycling life. More impressively, the fiber‐shaped ASC based on S‐MoO_3?x anode delivers extremely high volumetric capacitance of 6.19 F cm^?3 at 0.5 mA cm^?1, which makes it promising as one of the most attractive candidates of anode materials for high‐performance fiber‐shaped ASCs.     

Ultrastrong Medium‐Entropy Single‐Phase Alloys Designed via Severe Lattice Distortion

Severe lattice distortion is a core effect in the design of multiprincipal element alloys with the aim to enhance yield strength, a key indicator in structural engineering. Yet, the yield strength values of medium‐ and high‐entropy alloys investigated so far do not substantially exceed those of conventional alloys owing to the insufficient utilization of lattice distortion. Here it is shown that a simple VCoNi equiatomic medium‐entropy alloy exhibits a near 1 GPa yield strength and good ductility, outperforming conventional solid‐solution alloys. It is demonstrated that a wide fluctuation of the atomic bond distances in such alloys, i.e., severe lattice distortion, improves both yield stress and its sensitivity to grain size. In addition, the dislocation‐mediated plasticity effectively enhances the strength–ductility relationship by generating nanosized dislocation substructures due to massive pinning. The results demonstrate that severe lattice distortion is a key property for identifying extra‐strong materials for structural engineering applications.     

Thin‐film nanostructure and polymer architecture in semicrystalline syndiotactic poly(p‐methylstyrene)–(cis‐1,4‐polybutadiene) multiblock copolymers

The thin‐film morphology of stereoregular syndiotactic poly(p‐methylstyrene)–(cis‐1,4‐polybutadiene) (sP(pMS–B)) multiblock copolymers has been investigated using tapping mode atomic force microscopy with variation of the polymer composition and monomer block lengths. The morphology of the thin films ranges from isolated circular domains of sP(pMS) embedded into a matrix of polybutadiene (PB) to isolated domains of PB embedded into a matrix of sP(pMS), passing through bicontinuous (jagged) lamellae when the pMS concentration is in the range 20–67 mol%. Multiple folding of the polymer segments, i.e. where reciprocal inclusions of polymer segments to each other phase are able to generate greater domain, has been postulated and validated by considerations on the polymer architecture and the thermal and crystalline behaviour. © 2019 Society of Chemical Industry     

原子及近原子尺度制造——制造技术发展趋势

探讨了制造技术发展趋势，论述了制造历史发展的三个阶段，指出原子及近原子尺度制造（ACSM）是下一代制造技术的主流发展趋势，对未来科技发展和高端元件制造具有重要意义。详细分析阐述了ACSM的主要研究内容及关键科学问题，并提出了相应的建议和措施。